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Shane Adam Brubaker

from Richmond, CA
Age ~52
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Also known as:
Shane A Brubaker, Shane Te Brubaker, Shab Brubaker
Phone and address:
6843 Kenilworth Ave, Richmond, CA 94530
(510) 332-3986
Related to:
Darren Moore, 50Jason Moore, 41Samantha Moore, 33Samatha Moore
Connected to:
Alta L Brubaker, 72Andy Brubaker, 33Billy G Brubaker, 84Bryan E Brubaker, 44Casey O Brubaker, 52Claudia A Brubaker, 63Deborah A Brubaker, 62Ginger L Brubaker, 82Gwen Brubaker, 92Jacob W Brubaker, 45

Shane Brubaker Phones & Addresses

  • 6843 Kenilworth Ave, El Cerrito, CA 94530 (510) 332-3986
  • Richmond, CA
  • 372 45Th St, Oakland, CA 94609
  • 288 Whitmore St, Oakland, CA 94611 (510) 601-0202
  • 1650 Pearl St, Eugene, OR 97401
  • Berkeley, CA

Work

Company: Intrexon corporation Jan 2015 to Aug 2019 Position: Senior director, computational biology

Education

Degree: Master of Science, Masters School / High School: University of Oregon 1995 to 1997 Specialities: Biology

Skills

Genomics • Bioinformatics • Genetics • Dna Sequencing • Perl • Biotechnology • Microbiology • Computational Biology • High Throughput Screening • R • Protein Engineering • Molecular Biology • Microarray • Cell • Data Analysis • Linux • R&D • Sequencing • Databases • Sequence Analysis • Science • Assay Development • Statistics • Programming • Cell Biology • Data Mining • Genotyping • Machine Learning • Python • Oracle Database • Mysql • Php • Postgresql • .Net Framework • Sql • C# • Jmp • Spotfire • Tableau • Sas Programming • Ibm Db2 • Microsoft Sql Server • Bash • Apache • Java • Geneious

Industries

Biotechnology

Resumes

Resumes

Shane Brubaker Photo 1

Computational Biology Architect

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Location:
El Cerrito, CA
Industry:
Biotechnology
Work:
Intrexon Corporation Jan 2015 - Aug 2019
Senior Director, Computational Biology
Zymergen Jan 2015 - Aug 2019
Computational Biology Architect
Solazyme, Inc. Nov 2010 - Jan 2015
Director of Bioinformatics
Aurora Biofuels Aug 2009 - Nov 2010
Director of Bioinformatics
Ls9, Inc. Aug 2006 - Jul 2009
Bioinformatics Analyst Iii
Education:
University of Oregon 1995 - 1997
Master of Science, Masters, Biology Purdue University 1988 - 1992
Bachelors, Bachelor of Science, Computer Science
Skills:
Genomics
Bioinformatics
Genetics
Dna Sequencing
Perl
Biotechnology
Microbiology
Computational Biology
High Throughput Screening
R
Protein Engineering
Molecular Biology
Microarray
Cell
Data Analysis
Linux
R&D
Sequencing
Databases
Sequence Analysis
Science
Assay Development
Statistics
Programming
Cell Biology
Data Mining
Genotyping
Machine Learning
Python
Oracle Database
Mysql
Php
Postgresql
.Net Framework
Sql
C#
Jmp
Spotfire
Tableau
Sas Programming
Ibm Db2
Microsoft Sql Server
Bash
Apache
Java
Geneious

Business Records

Name / Title
Company / Classification
Phones & Addresses
Shane Brubaker
President
Nanozen Inc
Nonclassifiable Establishments
288 Whitmore St, Oakland, CA 94611

Publications

Us Patents

Method For Producing A Fatty Alcohol Or Fatty Aldehyde

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US Patent:
8268599, Sep 18, 2012
Filed:
Feb 22, 2010
Appl. No.:
12/710238
Inventors:
Andreas Schirmer - South San Francisco CA, US
Mathew Rude - South San Francisco CA, US
Shane Brubaker - Oakland CA, US
Assignee:
LS9, Inc. - South San Francisco CA
International Classification:
C12P 7/24
US Classification:
435147, 435 71, 435 691, 4353201, 530350
Abstract:
Compositions and methods for producing hydrocarbons such as aldehydes, alkanes, and alkenes are described herein. Certain hydrocarbons can be used in biofuels.

Methods And Compositions For Producing Hydrocarbons

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US Patent:
8323924, Dec 4, 2012
Filed:
Feb 22, 2010
Appl. No.:
12/710237
Inventors:
Andreas Schirmer - South San Francisco CA, US
Mathew Rude - South San Francisco CA, US
Shane Brubaker - Oakland CA, US
Assignee:
LS9, Inc. - South San Francisco CA
International Classification:
C12P 1/00
US Classification:
435 41, 435183, 435189, 4352523, 536 232
Abstract:
Compositions and methods for producing aldehydes, alkanes, and alkenes are described herein. The aldehydes, alkanes, and alkenes can be used in biofuels.

Modified Microorganisms And Uses Therefor

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US Patent:
8535916, Sep 17, 2013
Filed:
Feb 13, 2007
Appl. No.:
12/526209
Inventors:
Stephen B. Del Cardayre - Belmont CA, US
Shane Brubaker - Oakland CA, US
Jay D. Keasling - Berkeley CA, US
Assignee:
LS9, Inc. - South San Francisco CA
International Classification:
C12P 7/64
US Classification:
435134
Abstract:
The invention provides a genetically modified microorganism that acquires the ability to consume a renewable feedstock (such as cellulose) and produce products. This organism can be used to ferment cellulose, one of the most abundant renewable resources available, and produce products.

Methods For Detecting Transcriptional Factor Binding Sites

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US Patent:
20040115794, Jun 17, 2004
Filed:
Dec 12, 2002
Appl. No.:
10/318863
Inventors:
Shane Brubaker - Oakland CA, US
Assignee:
Affymetrix, INC. - Santa Clara CA
International Classification:
C12Q001/68
C12M001/34
US Classification:
435/287200, 435/006000
Abstract:
In some embodiments of the invention, microfluidic devices are provided for detecting nucleic acid binding proteins. Exemplary microfluidic devices include channels contain antibodies and hybridization chambers with oligonucleotide probe arrays.

Nanotube-Based Microarrays

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US Patent:
20040126802, Jul 1, 2004
Filed:
Dec 12, 2003
Appl. No.:
10/735790
Inventors:
Shane Brubaker - Oakland CA, US
Assignee:
Affymetrix, INC. - Santa Clara CA
International Classification:
C12Q001/68
C12M001/34
H01L021/00
US Classification:
435/006000, 435/287200, 438/001000
Abstract:
In one aspect of the invention, a nanotube based microarray is provided. The nanotube microarray contains nanotubes connecting with electrodes for detecting the electrical characteristics of nanotubes.

Production Of Fatty Acids & Derivatives Thereof

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US Patent:
20120142979, Jun 7, 2012
Filed:
Nov 22, 2011
Appl. No.:
13/302957
Inventors:
Jay D. KEASLING - Berkeley CA, US
Zhihao Hu - South San Francisco CA, US
Chris Somerville - Berkeley CA, US
George Church - Brookline MA, US
David Berry - Cambridge MA, US
Lisa Friedman - San Francisco CA, US
Andreas Schirmer - South San Francisco CA, US
Shane Brubaker - El Cerrito CA, US
Stephen B. Del Cardayre - South San Francisco CA, US
Assignee:
LS9, INC. - South San Francisco CA
International Classification:
C12P 7/04
C12N 1/19
C12N 1/21
C07C 33/025
C07C 31/125
US Classification:
5689095, 568840, 435157, 43525233, 4352523, 43525235, 43525421, 43525234
Abstract:
Compositions and methods for production of fatty alcohols using recombinant microorganisms are provided as well as fatty alcohol compositions produced by such methods.

Methods And Compositions For Producing Fatty Alcohols And Fatty Aldehydes

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US Patent:
20120282663, Nov 8, 2012
Filed:
Jul 18, 2012
Appl. No.:
13/552522
Inventors:
Andreas Schirmer - South San Francisco CA, US
Mathew Rude - South San Francisco CA, US
Shane Brubaker - El Cerrito CA, US
Assignee:
LS9, INC. - South San Francisco CA
International Classification:
C12P 7/24
C12N 1/21
C12N 1/15
C12N 1/13
C12P 7/04
C12N 1/19
US Classification:
435147, 435157, 4352542, 43525411, 4352572, 4352523
Abstract:
Compositions and methods for producing hydrocarbons such as aldehydes, alkanes, and alkenes are described herein. Certain hydrocarbons can be used in biofuels.

Methods And Compositions For Producing Hydrocarbons

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US Patent:
20130029395, Jan 31, 2013
Filed:
Sep 24, 2012
Appl. No.:
13/625107
Inventors:
Andreas W. SCHIRMER - South San Francisco CA, US
Mathew A. Rude - South San Francisco CA, US
Shane A. Brubaker - South San Francisco CA, US
Assignee:
LS9, INC. - South San Francisco CA
International Classification:
C12P 5/02
C12N 1/21
C12N 1/13
C12N 1/19
C12N 1/15
US Classification:
435167, 4352542, 43525411, 4352572, 4352523, 43525233
Abstract:
Compositions and methods for producing aldehydes, alkanes, and alkenes are described herein. The aldehydes, alkanes, and alkenes can be used in biofuels.
Control profile
Shane Adam Brubaker from Richmond, CA, age ~52 Get Report